Antibody Sequencing Services

EnkiLife | Antibody Sequencing Services

Antibody Sequencing Services

From hybridoma to sequence in 1 week.

Accurate determination of antibody variable and full-length sequences from hybridoma cells, B cells, or single B cells. Choose Sanger sequencing or mass spectrometry for protein-level de novo sequencing and PTM analysis. Species: human, mouse, rat, rabbit, and more.

Compare Methods                How It Works
Antibody Sequencing

Why Sequence from Hybridoma Cells?

🔍 Preserved Diversity

Captures natural antibody diversity from original B cell clone.

✅ Quality Control

Ensures sequenced antibody matches functional hybridoma clone.

🚀 Path to Recombinant Ab

Enables recombinant expression and antibody engineering.

🔒 IP Protection

Strict confidentiality for all sequence data.

Antibody Sequencing Workflow

Two workflows tailored to your sample type and research goals.

Antibody Sequencing
Route A

Sanger Sequencing

Antibody Sequencing

Sample: Hybridoma cells, B cells, or single B cells (>1×10⁶ cells)

1

RNA Extraction

Isolate total RNA

2

RT-PCR

Amplify variable & full-length regions

3

Sanger Sequencing

Capillary electrophoresis

4

Bioinformatics

CDR/FR annotation, V(D)J assignment

5

Delivery

Sequences + analysis report

⏱ Turnaround: 1 week

📋 Output: Nucleotide & amino acid sequences | Enables recombinant expression

Route B

Mass Spectrometry Sequencing

Antibody Sequencing

Sample: Purified antibody protein (≥50 µg)

1

Protein Purification

Purify from supernatant

2

Proteolytic Digestion

Generate peptide fragments

3

LC-MS/MS

Peptide separation & fragmentation

4

De Novo & PTM

Sequence assembly, PTM identification

5

Delivery

Full sequence + PTM report

⏱ Turnaround: 1 week

📋 Output: Amino acid sequence | PTM analysis | Disulfide mapping

Service Packages

Service PackageDeliverablesOptional Add-ons
Sanger Sequencing
Variable Domain / Full-Length Antibody
  • Variable region / full-length nucleotide sequences
  • Variable region / full-length amino acid sequences
  • FR and CDR analysis
  • V(D)J gene analysis
  • Sequencing plasmids with antibody coding sequence
  • Expression construct (light/heavy chain)
Mass Spectrometry Sequencing
De Novo Protein Sequencing
  • Full-length amino acid sequence coverage
  • Peptide fragment mass spectra data
  • Sequence confidence scores
  • CDR region identification
  • Post-translational modification (PTM) analysis
  • Disulfide bond mapping
  • Glycosylation site identification
  • Sequence variant analysis
  • Custom proteomics analysis

Sanger vs Mass Spectrometry

Sanger Sequencing

Best for: Individual hybridoma clones, nucleotide-level information.

  • High accuracy for single sequences
  • Provides nucleotide sequence (enables recombinant expression)
  • Full-length coding sequence available
  • Requires RNA/cell sample

Mass Spectrometry

Best for: Protein-level confirmation, PTM analysis, when RNA is unavailable.

  • Direct analysis of antibody protein
  • Identifies post-translational modifications
  • De novo sequencing without prior information
  • Works with purified antibody samples

Selection Criteria

FactorSanger SequencingMass Spectrometry
Sample TypeCells (hybridoma, B cells)Purified antibody protein
OutputNucleotide + deduced amino acidAmino acid sequence (protein-level)
PTM DetectionCannot detectComprehensive PTM identification
Recombinant ExpressionDirectly enablesRequires reverse translation
Best WhenNeed sequence for cloning; have hybridoma cellsProtein sample only; need PTM confirmation

Simple Quotation & Ordering

1

Submit Request

Email order@enkilife.com with target and host preference.

2

Consultation

TAM contacts you within 24h for strategy and quote.

3

Approval

Review and approve final order details and price.

4

Project Start

Project initiated; PM provides updates until delivery.

Start Your Monoclonal Project

To discuss your target and receive a customized proposal, please email order@enkilife.com. Our team is ready to assist you right away.

   💬 WhatsApp